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Home » Recipes » Muffins

Chocolate Chip Pancake Muffins

By Laura Fuentes Updated Apr 16, 2026

5 from 17 votes

Recipe

This post may contain affiliate links. Read our disclosure policy here.

These pancake muffins have a soft and fluffy texture with melted chocolate chips in every bite! It's an easy, kid-favorite breakfast you can make ahead. 

With this recipe for chocolate chip pancake muffins, you can turn everyone's favorite breakfast portable!

two chocolate chip pancake muffins on a plate

Easy Pancake Muffins with Chocolate Chips

Breakfast is a big deal around my house, and these pancake muffins are a delicious variation of my family's favorites: chocolate chip pancakes, but in a muffin! In this case, I included chocolate chips. For a less indulgent option, omit them and use berries like I do to make these also awesome mini blueberry pancake muffins.

Ingredients

You’ll need classic pancake ingredients: butter, sugar, regular or non-dairy milk, eggs, vanilla extract, all-purpose flour (or the same amount of gluten-free all-purpose flour), baking powder to help the batter rise, and salt. The delicious add-in is milk or semi-sweet chocolate chips.

How to Make Chocolate Chip Pancake Muffins

Before watching the video in the recipe card and cooking these muffins with me, check the easy steps:

  1. Sift the dry ingredients.
    It helps combine the ingredients and remove any clumps.
  2. Make the batter.
    Cream the butter and sugar with a hand mixer. Add the egg, vanilla, and milk, and mix until smooth. Add the dry ingredients to the wet ingredients and stir to form a thick but smooth batter. Fold in the chocolate chips. 
  3. Bake for 18 minutes.
    Or until a toothpick inserted in the center comes out with a few moist crumbs. Allow them to cool down slightly before serving. 

If you have a mini muffin pan, you can also make these muffins bite-sized! Lightly grease the pan with cooking spray, distribute the batter between the cups, and bake for 12 to 14 minutes or until a toothpick inserted in the center comes out with a few moist crumbs.

a muffin tin with six chocolate chip pancake muffins

How to Store These Muffins

Allow the baked muffins to cool, then place them in an airtight container and cover the tops with a paper towel. Store at room temperature for 2 to 4 days. You can refrigerate them, but it does alter the flavor and texture.

To extend their shelf life, freeze the muffins. Place them in a large zip bag and freeze for up to 2 months. To reheat, allow them to defrost on the counter or reheat in the microwave for 30 seconds to 1 minute

More Easy Muffin Recipes

Other delicious breakfast recipes you’ll love are these banana oat muffins, these lemon yogurt muffins, and these frozen strawberry muffins.

Easy Pancake Muffins with Chocolate Chips

two chocolate chip pancake muffins on a plate
Servings: 12 muffins
Prep Time: 10 minutes mins
Cook Time: 18 minutes mins
Total Time: 28 minutes mins
These pancake muffins have a soft and fluffy texture with melted chocolate chips in every bite! It's an easy, kid-favorite breakfast you can make ahead. 
5 from 17 votes
Print Pin

Watch how it’s made:

Ingredients

  • ½ cup butter, softened
  • ½ cup sugar
  • ⅔ cup milk
  • 2 large eggs
  • 1 tablespoon vanilla
  • 1 ½ cups all-purpose flour*
  • 1 tablespoon aluminum-free baking powder
  • ½ teaspoon salt
  • ¾ to 1 cup semi-sweet chocolate chips

Instructions

Prep:

  • Preheat the oven to 375F and line a muffin pan with paper liners. 

Make the batter:

  • In a large bowl, sift the flour, baking powder, and salt. Set aside. 
  • In a separate large bowl, cream the butter and sugar with a hand mixer. Add the eggs, vanilla, and milk, mix until smooth. 
  • Add the dry ingredients to the wet ingredients and mix until just combined. Fold in the chocolate chips. 

Bake:

  • Divide the batter into the muffin pan, filling each cup ¾th of the way.
  • Bake for 18 minutes or until a toothpick inserted in the center of a muffin comes out with a few moist crumbs, and the tops are golden brown.
  • Remove the muffins from the oven and allow them to cool slightly before removing them from the pan and serving. 

Serve & store:

  • Serve these muffins slightly warmed or at room temperature.
  • Store leftovers in an airtight container at room temperature, covering the tops with a paper towel, for 2 to 4 days; or freeze them for up to 2 months.

Notes

  • I successfully made this recipe with an all-purpose gluten free flour (already includes xantham gum in ingredients). You can also make this with white whole-wheat (also known as whole-wheat baking flour).
  • To save time, I often make the batter in my blender. I place the wet ingredients at the bottom and dry on top (except chocolate chips. I fold those in a the end). Blend until just combined, scraping the sides a couple of times.
  • Use the right baking powder: Since pancake batter naturally has a mild, neutral flavor, it’s important to use aluminum-free baking powder. The metallic flavor will ruin the taste, especially in fluffy pancake recipes that call for 2 or more teaspoons. Trust me on this one.

Equipment

¼ cup muffin batter scoop
Muffin Scoop
Clean Treats
Clean Treats Cookbook

Nutrition

Serving: 1 pancake muffin | Calories: 241kcal | Carbohydrates: 27g | Protein: 4g | Fat: 13g | Saturated Fat: 8g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 4g | Trans Fat: 0.3g | Cholesterol: 49mg | Sodium: 222mg | Potassium: 118mg | Fiber: 1g | Sugar: 13g | Vitamin A: 310IU | Calcium: 93mg | Iron: 2mg

More Muffins

  • top view of six mixed berry muffins
    Mixed Berry Muffins
  • top view of lemon blueberry muffins
    Lemon Blueberry Muffins
  • a tray with six pumpkin cottage cheese muffins
    Cottage Cheese Pumpkin Muffins
  • top view of seven Greek yogurt banana muffins
    Greek Yogurt Banana Muffins

Comments

    5 from 17 votes (9 ratings without comment)

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    Recipe Rating




  1. Amy J says

    March 08, 2017 at 2:40 pm

    5 stars
    I ALWAYS add sweet potato puree to my pancakes and muffins for a nutrition boost. I would add about one baby food sized jar to this recipe and lower the liquid / milk a tiny bit. Makes all my baked goods and pancakes taste that much better. Thanks for a great recipe!

    Reply
    • Laura Fuentes says

      March 08, 2017 at 3:00 pm

      great tip!

      Reply
  2. Leslie says

    October 08, 2016 at 9:06 pm

    5 stars
    I tried the recipe with two flax seed egg and Jules GFree flour. The muffins sank in the center, but tasted good. I may try the recipe again using mashed banana as a substitute for the egg.

    I liked using the blender to do the mixing. Much easier than creaming the butter and sugar. Great idea!

    Reply
    • Laura Fuentes says

      October 10, 2016 at 10:21 am

      I’m so glad it worked! The egg substitute will definitely change the texture but I’m glad it worked (enough) for you.

      Reply
  3. Erika says

    January 25, 2016 at 1:51 am

    5 stars
    Can I use almond milk instead of regular milk in this recipe?

    Reply
    • Laura Fuentes says

      January 25, 2016 at 10:16 am

      Absolutely.

      Reply
  4. Leslie says

    November 12, 2015 at 8:24 am

    5 stars
    I am confused about how many muffins this makes. The recipe says 12 muffins on the top, but then it says to line the muffin tin with 9 paper liners and pour the mix into 6 muffin cups.

    Also, I want to make this egg and gluten free. I will let you know how they turn out.

    If I want to make it in the blender, do I just stir the chocolate chips in at the end? I am afraid that they would get too broken up in the blender.

    Thanks! I love your recipes.

    Reply
    • Laura Fuentes says

      November 12, 2015 at 9:05 am

      My apologies, I’ve corrected the liners and yield. The recipe yields 6 muffins, which you can double. I make these gluten-free all the time but I can’t advise on egg free. I’d love to know how they turn out. If you make in in the blender, place wet ingredients at bottom, dry on top, fold chocolate chips at the end. Enjoy!

      Reply
  5. Michelle says

    November 12, 2015 at 6:36 am

    5 stars
    The recipe looks great and I can’t wait to try it, but I have a question. The recipe says it serves 12 muffins, but the recipe says to use 9 paper liners and fill only 6 muffin cups. How many muffins does this recipe make? I would definitely need 12 (or more) muffins for my family. Do I need to double the recipe amounts? Thanks.

    Reply
    • Laura Fuentes says

      November 12, 2015 at 9:07 am

      Sorry, as stated above, I’ve corrected the yield. The recipe yields 6, the one at the bottom yields 12. You can easily double the recipe and freeze too!

      Reply
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Hi! I'm Laura.
Certified Integrative Nutrition Health Coach, mom of three, and the woman behind the world’s best pancakes—here to help you ditch the mealtime drama with recipes your family will actually eat.

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